Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015845270.1_cds_XP_016509284.1_22227
CDS Infomation

[gene=LOC107826771] [db_xref=GeneID:107826771] [protein=pentatricopeptide repeat-containing protein At1g71060, mitochondrial-like] [protein_id=XP_016509284.1] [location=71063..72625] [gbkey=CDS]
Sequence

ATGAGTCTTCATCGATCCCTCAGCCGCATACCTAAAACCCTAATTCCTACACTTCACAGC
CCCACAAAACCCATAAAAAATGGAAACCCATTTCACAAATTATTGCCATTTTTTCAAATT
CATTACAATTCAGTGAATACCCATGCCTCTTCTAATGATAATAACCAAAACTCAAATCCC
CAAAATGCACTAATTAAACTGGAAGCAGAAAGAATCTGCAAAATTTTATTGAACACCACC
TGTTCGACGAAAGGTGTAGCTGATGCTTTGAGTTCTGTTTCAGGAAATGTGAATCCTTTA
TTAGTTGATGAGGTTGTAAAGAAGCTCAGCAATTCTGGGGTTTTAGCATTGTCTTTTTTC
CGTTGGGCTGAGAAACAGAACGGTTTCGTGCATACTTCAGAGAGTTATCATGGGTTGATT
GAAGCTCTAGGAAAGATCAAACAGTTTAAAATGGTTTGGATTTTGGTTGATGAGTTGAAG
AAGAAAGGGTTGTTGTGTAAAGAGGCATTTGCACTTATTTCACGAAGATATGCTCGTGCT
AGGAAGGTTAAAGAAGCTATCGAGGCATTTGAGAGGATGGAGAAATATGGATTGGTTGTT
GAGTTGCAAGATTTTAATAGATTGCTTGATACATTGAGCAAGTCTAGGAATGTTGGGAAA
GCACAAGAAGTGTTTGATAAATGGAAGAATAATGGGAAATTTAAGCCTAATATTAAGTCT
TATACTATATTGTTAGAAGGGTGGGGTGGAGAGAAGAATTTGTTGAGGCTAAATGAAGTT
TATCAGGAGATGAAGGCTGATGATATTGAGCCTGATGTTGTGAGCTATGGAATCATGATC
CATGCTCATTGCAAGGTTAAGAAGTATGATGAGGCGATTGAGTTGTTACGCGAAATGGAA
AGGAAGAAGATTAGGGTAACGCCTCATGTGTATTGCACGTTGATAAATGGTTTGGGATCG
GAGAAAAGGTTGGTCGAGGCTCTTAAGTATTTTGAGCTGTATAAGGGTAGTGGTTTTGAT
CTTGAGGTATTCACATTTAACGCAATGGTGGGAGCTTATTGCTGGTCTATGCGTATGGAT
GATGCATATAAGTTAGTCGATGAGATGAGGAGATGTAAGATTGGTCCGAATTCCAGAACA
TATGACATTATTCTTCACCATCTTATAAAAGCCAAAAGAACGAATGAAGCTTATTCGGTG
TTTCAGAAAATGAGCAATGATCCTGGGTGCGAACCGACTGTGAGTACATACGAGATAATG
GTGAGGATGTTCTGCAACGAGGACCGGACAGATATGGCTCTTCGAGTCTGGGATCAGATG
AAAGCTAGGGGAGTTCTTCCCGGAATGCATATGTTTTCGACATTGATCAACAGCTTTTGC
CATGAGAATAGATTGGATGATGCTTGTAGATACTTTCAAGAGATGCTTGACATGGGCATG
AGACCTCCACTTCCCTTGTTTGATAATCTAAAACGGACACTTCTTGAAGAGGGAAAAGAG
GATACTGTTAAAGCATTGTGGAGGAAACTTGAGAAACTAAAGAAAAGCAACTTAGTTGGA
TAG

Peptide Sequence

PEP ID

XP_016509284.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g71060, mitochondrial-like [Nicotiana tabacum]
Sequence

MSLHRSLSRIPKTLIPTLHSPTKPIKNGNPFHKLLPFFQIHYNSVNTHASSNDNNQNSNP
QNALIKLEAERICKILLNTTCSTKGVADALSSVSGNVNPLLVDEVVKKLSNSGVLALSFF
RWAEKQNGFVHTSESYHGLIEALGKIKQFKMVWILVDELKKKGLLCKEAFALISRRYARA
RKVKEAIEAFERMEKYGLVVELQDFNRLLDTLSKSRNVGKAQEVFDKWKNNGKFKPNIKS
YTILLEGWGGEKNLLRLNEVYQEMKADDIEPDVVSYGIMIHAHCKVKKYDEAIELLREME
RKKIRVTPHVYCTLINGLGSEKRLVEALKYFELYKGSGFDLEVFTFNAMVGAYCWSMRMD
DAYKLVDEMRRCKIGPNSRTYDIILHHLIKAKRTNEAYSVFQKMSNDPGCEPTVSTYEIM
VRMFCNEDRTDMALRVWDQMKARGVLPGMHMFSTLINSFCHENRLDDACRYFQEMLDMGM
RPPLPLFDNLKRTLLEEGKEDTVKALWRKLEKLKKSNLVG

Transcript Sequence

Gene sequence data has not been registered.